Study programme 2020-2021 | Français | ||
Data sciences and plankton | |||
Programme component of Master's in Biochemistry and Molecular and Cell Biology à la Faculty of Science |
Students are asked to consult the ECTS course descriptions for each learning activity (AA) to know what special Covid-19 assessment methods are possibly planned for the end of Q3 |
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Code | Type | Head of UE | Department’s contact details | Teacher(s) |
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US-M1-SCBBMC-049-M | Optional UE | GROSJEAN Philippe | S807 - Ecologie numérique |
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Language of instruction | Language of assessment | HT(*) | HTPE(*) | HTPS(*) | HR(*) | HD(*) | Credits | Weighting | Term |
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| Français | 5 | 0 | 35 | 0 | 0 | 3 | 3.00 | 2nd term |
AA Code | Teaching Activity (AA) | HT(*) | HTPE(*) | HTPS(*) | HR(*) | HD(*) | Term | Weighting |
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S-BIOG-070 | Data sciences and plankton | 5 | 0 | 35 | 0 | 0 | Q2 | 100.00% |
Programme component |
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Objectives of Programme's Learning Outcomes
Learning Outcomes of UE
At the end of this course, the sutdents will be able to classify main plankton groups on the basis of morphological criteria, and in the same time, they will be able to apply image analysis and machine learning techniques on a computer to classify this plankton (semi-)automatically. Thus, tey will have learned to apply advanced statistical techniques to solve a biological problem.
Content of UE
This course focuses on the study of plankton organisms with computers. It applies automation of the analysis and classification of plankton images.
Prior Experience
Use of the software R and RStudio. Bases in machine learning, including LDA, SVM and random forest, cross-validation and analysis of confusion matrices
Type of Assessment for UE in Q2
Q2 UE Assessment Comments
A report containing the description of the process leading to a trianing set, a classifier et the study of its performances to classify plankton, together with notes about morphological criteria used to establish the plankton groups to be discriminated.
Type of Assessment for UE in Q3
Q3 UE Assessment Comments
Similar to Q2.
Type of Teaching Activity/Activities
AA | Type of Teaching Activity/Activities |
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S-BIOG-070 |
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Mode of delivery
AA | Mode of delivery |
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S-BIOG-070 |
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Required Reading
AA | |
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S-BIOG-070 |
Required Learning Resources/Tools
AA | Required Learning Resources/Tools |
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S-BIOG-070 | Not applicable |
Recommended Reading
AA | |
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S-BIOG-070 |
Recommended Learning Resources/Tools
AA | Recommended Learning Resources/Tools |
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S-BIOG-070 | Not applicable |
Other Recommended Reading
AA | Other Recommended Reading |
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S-BIOG-070 | Not applicable |
Grade Deferrals of AAs from one year to the next
AA | Grade Deferrals of AAs from one year to the next |
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S-BIOG-070 | Authorized |