 | Study programme 2020-2021 | Français | |
| Algorithms and Bioinformatics | |||
Learning Activity |
| Code | Lecturer(s) | Associate Lecturer(s) | Subsitute Lecturer(s) et other(s) | Establishment |
|---|---|---|---|---|
| S-INFO-022 |
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| Language of instruction | Language of assessment | HT(*) | HTPE(*) | HTPS(*) | HR(*) | HD(*) | Term |
|---|---|---|---|---|---|---|---|
| Français | Français | 15 | 0 | 30 | 0 | 0 | Q1 |
| Organisational online arrangements for the end of Q3 2020-2021 assessments (Covid-19) |
|---|
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| Description of the modifications to the Q3 2020-2021 assessment procedures (Covid-19) |
| Oral exam in person for the theoretical part. In case of force majeure, the oral exam could be organized remotely via Teams by maintaining exactly the same modalities. For the practical part, group project to be submitted and which will be defended orally in face-to-facte (in case of force majeure, it will be remotely via Teams). For the exam on the theoretical part, the student choose a question at random, then has his written course notes to prepare the exam for 15 min. He then answers the question, the teacher asking him sub-questions in connection with the main question to assess his mastery of the subject. The defense of the project consists of questions and justifications relating to the work submitted by the group, it takes place in the presence of the course holder and the course assistant. The student having passed one of the parts in Q1, he must no longer represent it. His score can be kept for Q3. |
Organisational arrangements for the end of Q1 2020-2021 assessments (Covid-19) online or face-to-face (according to assessment schedule)
- Oral exam (questions and answers, presentation of individual or group work, comment and argument about a written text...)
- Production of individual or group work, essay, report, dissertation...
Description of the modifications to the Q1 2020-2021 online assessment procedures (Covid-19) online or face-to-face (according to assessment schedule)
Oral exam in person for the theoretical part. In case of force majeure, the oral exam could be organized remotely via Teams by maintaining exactly the same modalities. For the practical part, group project to be submitted and which will be defended orally in face-to-facte (in case of force majeure, it will be remotely via Teams).
For the exam on the theoretical part, the student choose a question at random, then has his written course notes to prepare the exam for 15 min. He then answers the question, the teacher asking him sub-questions in connection with the main question to assess his mastery of the subject.
The defense of the project consists of questions and justifications relating to the work submitted by the group, it takes place in the presence of the course holder and the course assistant.
Content of Learning Activity
Algorithms, complexity of algorithms, strings, string-matching, sequence alignment; suffix tree; DNA sequencing and fragment assembly
Required Learning Resources/Tools
Not applicable
Recommended Learning Resources/Tools
Not applicable
Other Recommended Reading
- Introduction to Computational Molecular Biology
J. Setubal, J. Meidanis
PWS Publishing Company, 1997
- Algorithmic Aspects of Bioinformatics
HJ Böckenhauer - D. Bongartz
Springer, 2007
Mode of delivery
- Face to face
Type of Teaching Activity/Activities
- Cours magistraux
- Conférences
- Préparations, travaux, recherches d'information
Evaluations
The assessment methods of the Learning Activity (AA) are specified in the course description of the corresponding Educational Component (UE)